neXtProt/NXQ_09454

Check there are no entries with a keyword in the category "Post-translational modification" that does not apply to human proteins

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>

select distinct ?entry where {  # Include ?kw if result is not 0 to identify problem keyword
  values ?kw {
  cv:KW-0102 # Bromination
  cv:KW-0190 # Covalent protein-DNA linkage
  cv:KW-0191 # Covalent protein-RNA linkage
  cv:KW-0885 # CTQ
  cv:KW-0208 # D-amino acid
  cv:KW-0291 # Formylation
  cv:KW-0556 # Organic radical
  cv:KW-0572 # Peptidoglycan-anchor
  cv:KW-0651 # Protein splicing
  cv:KW-0824 # TTQ
  }
  ?entry :isoform /:keyword /:term ?kw.
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?entry"):::projected 
  v1("?kw")
  a1((" "))
  a2((" "))
  bind0[/VALUES ?kw/]
  bind0-->v1
  bind00([":terminology/KW-0102"])
  bind00 --> bind0
  bind01([":terminology/KW-0190"])
  bind01 --> bind0
  bind02([":terminology/KW-0191"])
  bind02 --> bind0
  bind03([":terminology/KW-0885"])
  bind03 --> bind0
  bind04([":terminology/KW-0208"])
  bind04 --> bind0
  bind05([":terminology/KW-0291"])
  bind05 --> bind0
  bind06([":terminology/KW-0556"])
  bind06 --> bind0
  bind07([":terminology/KW-0572"])
  bind07 --> bind0
  bind08([":terminology/KW-0651"])
  bind08 --> bind0
  bind09([":terminology/KW-0824"])
  bind09 --> bind0
  v2 --":isoform"-->  a1
  a1 --":keyword"-->  a2
  a2 --":term"-->  v1