A set of SPARQL examples that are used in different SIB resources
Check there are no entries with a variant, responsible for a disease, that do not have the keyword KW-0225 (Disease mutation)
PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
select distinct ?entry where {
?entry :isoform /:variant /:disease ?dis.
filter not exists {?entry :isoform /:keyword /:term cv:KW-0225.}
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?dis")
v1("?entry"):::projected
a3((" "))
a4((" "))
a1((" "))
a2((" "))
c4([":terminology/KW-0225"]):::iri
f0[["not "]]
subgraph f0e0["Exists Clause"]
e0v1 --":isoform"--> e0a1
e0a1 --":keyword"--> e0a2
e0a2 --":term"--> e0c4
e0v1("?entry"):::projected
e0a1((" ")):::projected
e0a2((" ")):::projected
e0c4([":terminology/KW-0225"]):::iri
end
f0--EXISTS--> f0e0
f0 --> v1
f0 --> c1
f0 --> a1
f0 --> c2
f0 --> a2
f0 --> c3
f0 --> c4
v1 --":isoform"--> a1
a1 --":keyword"--> a2
a2 --":term"--> c4
v1 --":isoform"--> a3
a3 --":variant"--> a4
a4 --":disease"--> v2