sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub sib-swiss/sparql-examples

NXQ_09674

rq turtle/ttl

Check there are no entries with expression profile annotations with evidence from microarray with an expression level other than detected or not detected

Use at

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>

select distinct ?entry where {
  ?entry :isoform ?iso.
  ?iso :expressionProfile /:evidence ?ev.
  ?ev :evidenceCode cv:ECO_0000104. # microarray
  ?ev :expressionLevel ?level
  filter ( ?level not in (:Negative, :Positive))
}
:isoform
:expressionProfile
:evidence
:evidenceCode
:expressionLevel
?entry
?ev
?iso
?level
:terminology/ECO_0000104
?level != ':Negative'?level != ':Positive'