neXtProt/NXQ_09690

Check there are no entries with expression profile annotations with evidence from HPA to an anatomy term which is different from the anatomy term in the experimental context

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX source: <http://nextprot.org/rdf/source/>

select distinct ?entry where {
  ?entry :isoform ?iso.
  ?iso :expressionProfile ?exp.
  ?exp :term ?term1.
  ?exp :evidence ?ev.
  ?ev :assignedBy source:Human_protein_atlas.
  ?ev :experimentalContext /:tissue ?term2.
  filter (?term1 != ?term2)
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v3("?entry"):::projected 
  v6("?ev")
  v5("?exp")
  v4("?iso")
  v1("?term1")
  v2("?term2")
  a1((" "))
  c6([":source/Human_protein_atlas"]):::iri 
  f0[["?term1 != ?term2"]]
  f0 --> v1
  f0 --> v2
  v3 --":isoform"-->  v4
  v4 --":expressionProfile"-->  v5
  v5 --":term"-->  v1
  v5 --":evidence"-->  v6
  v6 --":assignedBy"-->  c6
  v6 --":experimentalContext"-->  a1
  a1 --":tissue"-->  v2