A set of SPARQL examples that are used in different SIB resources
Check there are no entries with a binary interaction annotation from ENYO with no publication in evidence
PREFIX : <http://nextprot.org/rdf/>
PREFIX cv: <http://nextprot.org/rdf/terminology/>
PREFIX source: <http://nextprot.org/rdf/source/>
select distinct ?entry where {
?entry :isoform /:binaryInteraction ?int.
?int :evidence ?ev.
?ev :assignedBy source:ENYO.
?ev :reference ?ref.
filter not exists {?ref a :Publication}
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?entry"):::projected
v4("?ev")
v3("?int")
v1("?ref")
a1((" "))
c2([":Publication"]):::iri
c7([":source/ENYO"]):::iri
f0[["not "]]
subgraph f0e0["Exists Clause"]
e0v1 --"a"--> e0c2
e0v1("?ref"):::projected
e0c2([":Publication"]):::iri
end
f0--EXISTS--> f0e0
f0 --> v1
f0 --> c1
f0 --> c2
v1 --"a"--> c2
v2 --":isoform"--> a1
a1 --":binaryInteraction"--> v3
v3 --":evidence"--> v4
v4 --":assignedBy"--> c7
v4 --":reference"--> v1