Precourse preparations
R and RStudio
Previous knowledge / Competencies
As is stated in the course prerequisites on the announcement web page, we expect participants to have previous knowledge in:
- statistics beginner level (T-test, multiple testing methods).
- R beginner level (Rstudio, install a library, data frame manipulation, import data from csv file). Test your R skills with the quiz here
Technical
This course will be streamed, you are thus required to have your own computer with an internet connection, and with latest the version of R and the free version of RStudio installed.
You can install the necessary packages using:
install.packages("BiocManager")
BiocManager::install("clusterProfiler")
BiocManager::install("org.Hs.eg.db")
BiocManager::install("pathview")
BiocManager::install("enrichplot")
BiocManager::install("biomaRt")
install.packages("ggplot2")
install.packages("ggrepel")
install.packages("msigdbr")
install.packages("ggnewscale")
install.packages("ggridges")
install.packages("tidyverse")