Course schedule

Note

Other than the starting time, the time schedule is an approximation. Because we cannot plan a course by the minute, in practice the time points will deviate.

Day 1

block start end subject
introduction 9:15 AM 9:30 AM Introduction
block 1 9:30 AM 10:15 AM Introduction scRNAseq
10:15 AM 10:45 AM BREAK
block 2 10:45 AM 12:00 PM Presentation: Andreia Gouvêa, 10X Field Application Scientist
12:00 PM 1:00 PM BREAK
block 3 1:00 PM 3:00 PM Cell Ranger
3:00 PM 3:30 PM BREAK
block 4 3:30 PM 5:00 PM Quality Control and Normalization and Scaling

Day 2

block start end subject
block 1 9:15 AM 10:15 AM Normalization and Scaling
10:15 AM 10:45 AM BREAK
block 2 10:45 AM 12:15 PM Dimensionality Reduction and Integration
12:15 PM 1:15 PM BREAK
block 3 1:15 PM 3:00 PM Clustering and Visualization
3:00 PM 3:30 PM BREAK
block 4 3:30 PM 5:00 PM Visualization & Cell Annotation

Day 3

block start end subject
block 1 9:15 AM 10:30 AM Transcription factor analysis
10:30 AM 11:00 AM BREAK
block 2 11:00 AM 12:30 PM Trajectory Inference
12:30 PM 1:30 PM BREAK
block 3 1:30 PM 3:00 PM RNA velocity
3:00 PM 3:30 PM BREAK
block 4 3:30 PM 5:00 PM RNA velocity